Sequence heterogeneity of nSSR and cpDNA loci of Cucurbits (Citrullus sp.)

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dc.contributor.authorTóth, Zoltán
dc.contributor.authorGyulai, Gábor
dc.contributor.authorSzabó, Zoltán
dc.contributor.authorHorváth, Lajos
dc.contributor.authorGyulai, Ferenc
dc.contributor.authorHeszky, László
dc.date.accessioned2021-06-28T10:59:04Z
dc.date.available2021-06-28T10:59:04Z
dc.date.issued2007-11-15
dc.description.abstractThe evolution of water melon (Citrullus lanatus) microsatellites from the 15th century (Debrecen); 13th (Buda); and 18th century, (Pannonhalma) were analyzed. Microsatellite (nSSR, nuclear simple sequence repeat) and cpDNA profiles of the aDNA (ancient DNA) of seed remains were compared to modern water melon cultivars and landraces. Sixteen primer pairs were applied. Sequence analysis at the (CT)26 and cpDNA trnV loci revealed a (CT)3 and Adenin deletions, respectively, form the current water melon cultivar compared to the medieval sample. Cila-1), a new LTR retrotansposon has been described. For morphological reconstruction, a dendrogram produced by SPSS11 based on the presence versus absence of 24 phenotypic characters were also analyzed.en
dc.formatapplication/pdf
dc.identifier.citationActa Agraria Debreceniensis, No. 27 (2007) , 125-134
dc.identifier.doihttps://doi.org/10.34101/actaagrar/27/3115
dc.identifier.issn2416-1640
dc.identifier.issue27
dc.identifier.jatitleActa agrar. Debr.
dc.identifier.jtitleActa Agraria Debreceniensis
dc.identifier.urihttps://hdl.handle.net/2437/316635en
dc.languageen
dc.relationhttps://ojs.lib.unideb.hu/actaagrar/article/view/3115
dc.rights.accessOpen Access
dc.subjectmicrosatellitesen
dc.subjectwatermelonen
dc.subjectLTR-retrotransposonen
dc.subjectsequence alignmenten
dc.titleSequence heterogeneity of nSSR and cpDNA loci of Cucurbits (Citrullus sp.)en
dc.typefolyóiratcikkhu
dc.typearticleen
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