The research team has developed a complex system that is capable to record and analyse various psychophysiological data. This article represents the program created in NI DIAdem which can automatically identify illnesses and generate reports based on the input and saved parameters. The created program can import data from different types of file formats. It is converted and saved in a new standardized format for further processing. It can play-back the processed data synchronized with adjustable speed, and visualize them on customized display areas. It can analyse the data based on the input parameters and the pre-defined mathematical equations. The program displays the input and calculated parameters, the results and the detected illnesses on automatically generated reports.