Composition of intestinal bacterial community in ducks through high-throughput amplicon sequencing of 16S rRNA gene

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dc.contributor.authorFarkas, Valéria
dc.contributor.authorMolnár, Andor
dc.contributor.authorMenyhárt, László
dc.contributor.authorSuch, Nikoletta
dc.contributor.authorRawash, Mohamed Ali
dc.contributor.authorDublecz, Károly
dc.contributor.statusPhD hallgatóhu_HU
dc.contributor.statusegyetemi oktató, kutatóhu_HU
dc.coverage.temporal2020.04.30.hu_HU
dc.date.accessioned2022-07-13T07:45:46Z
dc.date.available2022-07-13T07:45:46Z
dc.description.abstractLittle research has been conducted on the gut microbiome of the duck, although global duck meat production is steadily rising. The aim of the present study was to compare the composition of caecal microbiota of Cherry Valley ducks with the results of previous research. In total, 120 one-day-old ducks were purchased from a commercial hatchery and randomly assorted into 12 pens which had wheat straw litter as bedding material. On day 42, caecal chymus samples were collected from 12 pens including 2 ducks per pen. Samples in each pen were pooled after DNA extraction and analyzed by 16S rRNA gene targeted Illumina MiSeq sequencing. Bacteroidetes (59.36%), Firmicutes (30.70%), Proteobacteria (5.45%) were the dominant phyla in the caecum. At the genus level, Bacteroides, Prevotella, Megamonas, Barnesiella, Helicobacter were most abundant (31.35%, 17.20%, 6.78%, 3.79% and 2.49% respectively)hu_HU
dc.format.extent7hu_HU
dc.identifier.urihttp://hdl.handle.net/2437/335892
dc.language.isoenhu_HU
dc.subjectduckhu_HU
dc.subjectgut microbiomehu_HU
dc.subjectcaecal microbiotahu_HU
dc.subjecthigh-throughput amplicon sequencinghu_HU
dc.subject.disciplinetudományterületek::állattenyésztési tudományokhu_HU
dc.titleComposition of intestinal bacterial community in ducks through high-throughput amplicon sequencing of 16S rRNA genehu_HU
dc.typekonferencia kiadványhu_HU
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Gyűjtemények
Festetics DI